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dc.contributor.authorKhamzin, S.en
dc.contributor.authorDokuchaev, A.en
dc.contributor.authorBazhutina, A.en
dc.contributor.authorChumarnaya, T.en
dc.contributor.authorZubarev, S.en
dc.contributor.authorLyubimtseva, T.en
dc.contributor.authorLebedeva, V.en
dc.contributor.authorLebedev, D.en
dc.contributor.authorGurev, V.en
dc.contributor.authorSolovyova, O.en
dc.date.accessioned2022-05-12T08:23:47Z-
dc.date.available2022-05-12T08:23:47Z-
dc.date.issued2021-
dc.identifier.citationMachine Learning Prediction of Cardiac Resynchronisation Therapy Response From Combination of Clinical and Model-Driven Data / S. Khamzin, A. Dokuchaev, A. Bazhutina et al. // Frontiers in Physiology. — 2021. — Vol. 12. — 753282.en
dc.identifier.issn1664-042X-
dc.identifier.otherAll Open Access, Gold, Green3
dc.identifier.urihttp://elar.urfu.ru/handle/10995/111830-
dc.description.abstractBackground: Up to 30–50% of chronic heart failure patients who underwent cardiac resynchronization therapy (CRT) do not respond to the treatment. Therefore, patient stratification for CRT and optimization of CRT device settings remain a challenge. Objective: The main goal of our study is to develop a predictive model of CRT outcome using a combination of clinical data recorded in patients before CRT and simulations of the response to biventricular (BiV) pacing in personalized computational models of the cardiac electrophysiology. Materials and Methods: Retrospective data from 57 patients who underwent CRT device implantation was utilized. Positive response to CRT was defined by a 10% increase in the left ventricular ejection fraction in a year after implantation. For each patient, an anatomical model of the heart and torso was reconstructed from MRI and CT images and tailored to ECG recorded in the participant. The models were used to compute ventricular activation time, ECG duration and electrical dyssynchrony indices during intrinsic rhythm and BiV pacing from the sites of implanted leads. For building a predictive model of CRT response, we used clinical data recorded before CRT device implantation together with model-derived biomarkers of ventricular excitation in the left bundle branch block mode of activation and under BiV stimulation. Several Machine Learning (ML) classifiers and feature selection algorithms were tested on the hybrid dataset, and the quality of predictors was assessed using the area under receiver operating curve (ROC AUC). The classifiers on the hybrid data were compared with ML models built on clinical data only. Results: The best ML classifier utilizing a hybrid set of clinical and model-driven data demonstrated ROC AUC of 0.82, an accuracy of 0.82, sensitivity of 0.85, and specificity of 0.78, improving quality over that of ML predictors built on clinical data from much larger datasets by more than 0.1. Distance from the LV pacing site to the post-infarction zone and ventricular activation characteristics under BiV pacing were shown as the most relevant model-driven features for CRT response classification. Conclusion: Our results suggest that combination of clinical and model-driven data increases the accuracy of classification models for CRT outcomes. Copyright © 2021 Khamzin, Dokuchaev, Bazhutina, Chumarnaya, Zubarev, Lyubimtseva, Lebedeva, Lebedev, Gurev and Solovyova.en
dc.description.sponsorshipThis work was supported by Russian Science Foundation grant no. 19-14-00134.en
dc.format.mimetypeapplication/pdfen
dc.language.isoenen
dc.publisherFrontiers Media S.A.en1
dc.publisherFrontiers Media SAen
dc.relationinfo:eu-repo/grantAgreement/RSF//19-14-00134en
dc.rightsinfo:eu-repo/semantics/openAccessen
dc.sourceFront. Physiol.2
dc.sourceFrontiers in Physiologyen
dc.subjectCARDIAC MODELINGen
dc.subjectCARDIAC RESYNCHRONIZATION THERAPYen
dc.subjectELECTROPHYSIOLOGYen
dc.subjectHEART FAILUREen
dc.subjectHYBRID APPROACHen
dc.subjectMACHINE LEARNINGen
dc.subjectPREDICTIONen
dc.titleMachine Learning Prediction of Cardiac Resynchronisation Therapy Response From Combination of Clinical and Model-Driven Dataen
dc.typeArticleen
dc.typeinfo:eu-repo/semantics/articleen
dc.typeinfo:eu-repo/semantics/publishedVersionen
dc.identifier.rsi47549916-
dc.identifier.doi10.3389/fphys.2021.753282-
dc.identifier.scopus85121850404-
local.contributor.employeeKhamzin, S., Institute of Immunology and Physiology Ural Branch, Russian Academy of Sciences, Yekaterinburg, Russian Federation; Dokuchaev, A., Institute of Immunology and Physiology Ural Branch, Russian Academy of Sciences, Yekaterinburg, Russian Federation; Bazhutina, A., Institute of Immunology and Physiology Ural Branch, Russian Academy of Sciences, Yekaterinburg, Russian Federation, Ural Federal University, Yekaterinburg, Russian Federation; Chumarnaya, T., Institute of Immunology and Physiology Ural Branch, Russian Academy of Sciences, Yekaterinburg, Russian Federation; Zubarev, S., Almazov National Medical Research Centre, Saint Petersburg, Russian Federation; Lyubimtseva, T., Almazov National Medical Research Centre, Saint Petersburg, Russian Federation; Lebedeva, V., Almazov National Medical Research Centre, Saint Petersburg, Russian Federation; Lebedev, D., Almazov National Medical Research Centre, Saint Petersburg, Russian Federation; Gurev, V., IBM Research, Yorktown, NY, United States; Solovyova, O., Institute of Immunology and Physiology Ural Branch, Russian Academy of Sciences, Yekaterinburg, Russian Federation, Ural Federal University, Yekaterinburg, Russian Federationen
local.volume12-
dc.identifier.wos000737529300001-
local.contributor.departmentInstitute of Immunology and Physiology Ural Branch, Russian Academy of Sciences, Yekaterinburg, Russian Federation; Ural Federal University, Yekaterinburg, Russian Federation; Almazov National Medical Research Centre, Saint Petersburg, Russian Federation; IBM Research, Yorktown, NY, United Statesen
local.identifier.pure29207012-
local.description.order753282-
local.identifier.eid2-s2.0-85121850404-
local.fund.rsf19-14-00134-
local.identifier.wosWOS:000737529300001-
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